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Publications

The following publications have been produced by iAtlantic researchers in connection with their project work. All are open access unless otherwise stated.

Please also check our Frontiers Research topic Managing Deep-sea and Open Ocean Ecosystems at Ocean Basin Scale – Volume 2: https://www.frontiersin.org/research-topics/26134/managing-deep-sea-and-open-ocean-ecosystems-at-ocean-basin-scale—volume-2. This is the second issue of the Research Topic: Managing Deep-sea and Open Ocean Ecosystems at Ocean Basin Scale. The original article collection Managing Deep-sea Ecosystems at Ocean Basin Scale – Volume 1 can be found here: https://www.frontiersin.org/research-topics/7768/managing-deep-sea-ecosystems-at-ocean-basin-scale—volume-1.

Your paper not listed here? Please contact the iAtlantic Project Office.
  1. Johnson C. et al. (2020): Significance of Climate Indices to Benthic Conditions Across the Northern North Atlantic and Adjacent Shelf Seas. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2020.00002
  2. Hutchinson K. et al. (2020): Water Mass Characteristics and Distribution Adjacent to Larsen C Ice Shelf, Antarctica. JGR Oceans, https://doi.org/10.1029/2019JC015855
  3. Pearman T.R.R. et al. (2020): Improving the predictive capability of benthic species distribution models by incorporating oceanographic data – towards holistic ecological modelling of a submarine canyon. Progress in Oceanography, https://doi.org/10.1016/j.pocean.2020.102338
  4. Horton T. et al. (2020): Are abyssal scavenging amphipod assemblages linked to climate cycles? Progress in Oceanography, https://doi.org/10.1016/j.pocean.2020.102318
  5. Kiko R. et al. (2020): Zooplankton-Mediated Fluxes in the Eastern Tropical North Atlantic. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2020.00358
  6. Harbour R.P. et al. (2020): Benthic and Demersal Scavenger Biodiversity in the Eastern End of the Clarion-Clipperton Zone – An Area Marked for Polymetallic Nodule Mining. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2020.00458
  7. Kiko R. et al. (2020): Editorial: Zooplankton and Nekton: Gatekeepers of the Biological Pump. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2020.00545
  8. Burmeister K. et al. (2020): Fluctuations of the Atlantic North Equatorial Undercurrent and associated changes in oxygen transports. Geophysical Research Letters, https://doi.org/10.1029/2020GL088350
  9. Hennige S.J. et al. (2020): Crumbling Reefs and Cold-Water Coral Habitat Loss in a Future Ocean: Evidence of “Coralporosis” as an Indicator of Habitat Integrity. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2020.00668
  10. Gaebel C. et al. (2020): Recognising Stakeholder Conflict and Encouraging Consensus of ‘Science-Based Management’ Approaches for Marine Biodiversity Beyond National Jurisdiction (BBNJ). Frontiers in Marine Science, https://doi.org/10.3389/fmars.2020.557546
  11. Appah J.K.M. et al. (2020): Are Non-reef Habitats as Important to Benthic Diversity and Composition as Coral Reef and Rubble Habitats in Submarine Canyons? Analysis of Controls on Benthic Megafauna Distribution in the Porcupine Bank Canyon, NE Atlantic. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2020.571820
  12. Lim A. et al. (2020): Influence of benthic currents on cold-water coral habitats: a combined benthic monitoring and 3D photogrammetric investigation. Nature Scientific Reports, https://doi.org/10.1038/s41598-020-76446-y
  13. Langley B. et al. (2020): A New Method for Isolating and Analysing Coccospheres within Sediment. Scientific Reports, http://dx.doi.org/10.1038/s41598-020-77473-5
  14. De Clippele L.H. et al. (2020): Mapping cold-water coral biomass: an approach to derive ecosystem functions. Coral Reefs, https://doi.org/10.1007/s00338-020-02030-5
  15. Hoving H.J.T. et al. (2020): In situ observations show vertical community structure of pelagic fauna in the eastern tropical North Atlantic of Cape Verde. Scientific Reports, https://doi.org/10.1038/s41598-020-78255-9
  16. Lim A. et al. (2020): Cold-Water Coral Habitat Mapping: Trends and Developments in Acquisition and Processing Methods. Geosciences, https://doi.org/10.3390/geosciences11010009
  17. Ison S. et al. (2021): Tourist Preferences for Seamount Conservation in the Galapagos Marine Reserve. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2020.602767
  18. Macedo Cruz de Oliveira L. et al. (2021): 3D Classification of Cold-Water Coral Reefs: A Comparison of Classification Techniques for 3D Reconstructions of Cold-Water Coral Reefs and Seabed. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2021.640713
  19. Price D.M. et al. (2021): Fine-scale heterogeneity of a cold-water coral reef and its influence on the distribution of associated taxa. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2021.556313
  20. Chiessi C.M. et al. (2021): Mid- to Late Holocene Contraction of the Intertropical Convergence Zone Over Northeastern South America. Paleoceanography and Paleoclimatology, https://doi.org/10.1029/2020PA003936
  21. Chidichimo M.P. et al. (2021): Brazil Current Volume Transport Variability During 2009–2015 From a Long-Term Moored Array at 34.5°S. JGR Oceans, https://doi.org/10.1029/2020JC017146
  22. Dominguez-Carrió C. et al. (2021): A cost-effective video system for a rapid appraisal of deep-sea benthic habitats: the Azor drift-cam. Methods in Ecology and Evolution, https://doi.org/10.1111/2041-210X.13617
  23. Gould W.J. and Cunningham S.A. (2021): Global-scale patterns of observed sea surface salinity intensified since the 1870s. Communications Earth and Environment, https://doi.org/10.1038/s43247-021-00161-3
  24. Wheeler A.J. et al. (2021): The “Little MonSta” deep-sea benthic, precision deployable, multi-sensor and sampling lander array. Sensors, https://doi.org/10.3390/s21103355
  25. Rakka M. et al. (2021): Contrasting metabolic strategies of two co-occurring deep-sea octocorals. Scientific Reports, https://doi.org/10.1038/s41598-021-90134-5
  26. Schulzki T. et al. (2021): On the Variability of the DWBC Transport Between 26.5°N and 16°N in an Eddy-Rich Ocean Model. JGR Oceans, https://doi.org/10.1029/2021JC017372
  27. Durden J.M. et al. (2021): Automated classification of fauna in seabed photographs: The impact of training and validation dataset size, with considerations for the class imbalance. Progress in Oceanography, https://doi.org/10.1016/j.pocean.2021.102612
  28. Van Audenhaege L. et al. (2021): High-resolution vertical habitat mapping of a deep-sea cliff offshore Greenland. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2021.669372
  29. De Clippele L.H. and Risch D. (2021): Measuring Sound at a Cold-Water Coral Reef to Assess the Impact of COVID-19 on Noise Pollution. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2021.674702
  30. Combes M. et al. (2021): Systematic Conservation Planning at an Ocean Basin Scale: Identifying a Viable Network of Deep-Sea Protected Areas in the North Atlantic and the Mediterranean. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2021.611358
  31. Kazanidis G. et al. (2021): Sensitivity of a cold‐water coral reef to interannual variability in regional oceanography. Diversity and Distributions, https://doi.org/10.1111/ddi.13363
  32. Kazanidis G. et al. (2021): Hidden structural heterogeneity enhances marine hotspots’ biodiversity. Coral Reefs, https://doi.org/10.1007/s00338-021-02114-w
  33. Orejas C. et al. (2021): Madrepora oculata forms large frameworks in hypoxic waters off Angola (SE Atlantic). Scientific Reports, https://doi.org/10.1038/s41598-021-94579-6
  34. Rakka M. et al. (2021): Embryo and larval biology of the deep-sea octocoral Dentomuricea aff. Meteor under different temperature regimes. PeerJ, https://doi.org/10.7717/peerj.11604
  35. Hennige S.J. et al. (2021): Using the Goldilocks Principle to model coral ecosystem engineering. Proceedings of the Royal Society B, https://doi.org/10.1098/rspb.2021.1260
  36. Günther B. et al. (2021): Metabarcoding confirms the opportunistic foraging behaviour of Atlantic bluefin tuna and reveals the importance of gelatinous prey. PeerJ, https://doi.org/10.7717/peerj.11757
  37. Cleland J. et al. (2021): Distribution of Megabenthic Communities Under Contrasting Settings in Deep-Sea Cold Seeps Near Northwest Atlantic Canyons. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2021.692851
  38. Biastoch A. et al. (2021): Regional imprints of changes in the Atlantic Meridional Overturning Circulation in the eddy-rich ocean model VIKING20X. Ocean Science, https://doi.org/10.5194/os-17-1177-2021
  39. Vad J. et al. (2021): Human impacts on deep-sea sponge grounds: Applying environmental omics to monitoring. Advances in Marine Biology, https://www.sciencedirect.com/science/article/pii/S0065288121000237?dgcid=author
  40. O’Brien C.L. et al. (2021): Exceptional 20th Century Shifts in Deep-Sea Ecosystems Are Spatially Heterogeneous and Associated With Local Surface Ocean Variability. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2021.663009
  41. De Clippele L.H. et al. (2021):  Biomass Mapping for an Improved Understanding of the Contribution of Cold-Water Coral Carbonate Mounds to C and N Cycling. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2021.721062
  42. Nascimento R.A. et al. (2021): Origin of δ13C minimum events in thermocline and intermediate waters of the western South Atlantic. Quaternary Science Reviews, https://doi.org/10.1016/j.quascirev.2021.107224
  43. Morato T. et al. (2021): Dense cold-water coral garden of Paragorgia johnsoni suggests the importance of the Mid-Atlantic Ridge for deep-sea biodiversity. Ecology and Evolution, https://doi.org/10.1002/ece3.8319
  44. van Denderen P.D. et al. (2021): A policy-based framework for the determination of management options to protect vulnerable marine ecosystems under the EU deep-sea access regulations. ICES Journal of Marine Science, https://doi.org/10.1093/icesjms/fsab237
  45. Das D. et al. (2022): Distribution models of deep-sea elasmobranchs in the Azores, Mid-Atlantic Ridge, to inform spatial planning. Deep Sea Research Part I: Oceanographic Research Papers, https://doi.org/10.1016/j.dsr.2022.103707
  46. Mayorga-Adame C.G. et al. (2022): Spatiotemporal scales of larval dispersal and connectivity among oil and gas structures in the North Sea. Marine Ecology Progress Series, https://doi.org/10.3354/meps13970
  47. Corbera G. et al. (2022): Glacial-aged development of the Tunisian Coral Mound Province controlled by glacio-eustatic oscillations and changes in surface productivity. Marine Geology, https://doi.org/10.1016/j.margeo.2022.106772  
  48. Van Audenhaege L. et al. (2022): Long-term monitoring reveals unprecedented stability of a vent mussel assemblage on the Mid-Atlantic Ridge. Progress in Oceanography, https://doi.org/10.1016/j.pocean.2022.102791
  49. Wardell C. and Huvenne V.A.I. (2022): Broadscale Landscape Mapping Provides Insight into the Commonwealth of Dominica and Surrounding Islands Offshore Environment. Remote Sensing, https://doi.org/10.3390/rs14081820  
  50. Kazanidis G. et al. (2022): One on Top of the Other: Exploring the Habitat Cascades Phenomenon in Iconic Biogenic Marine Habitats. Diversity, https://doi.org/10.3390/d14040290
  51. Matabos M. et al. (2022): Integrating Multidisciplinary Observations in Vent Environments (IMOVE): Decadal Progress in Deep-Sea Observatories at Hydrothermal Vents. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2022.866422
  52. Puerta P. et al. (2022): Variability of deep-sea megabenthic assemblages along the western pathway of the Mediterranean outflow water. Deep-Sea Research Part I, https://doi.org/10.1016/j.dsr.2022.103791
  53. Selway C.A. et al. (2022): An Outlook for the Acquisition of Marine Sedimentary Ancient DNA (sedaDNA) from North Atlantic Ocean Archive Material. Palaeoceanography and Paleoclimatology, https://doi.org/10.1029/2021PA004372
  54. da Costa Portilho-Ramos R. et al. (2022): Major environmental drivers determining life and death of cold-water corals through time. Plos Biology, https://doi.org/10.1371/journal.pbio.3001628
  55. Appah J.K.M. et a. (2022): A health survey of the reef forming scleractinian cold-water corals Lophelia pertusa and Madrepora oculata in a remote submarine canyon on the European continental margin, NE Atlantic. Journal of Invertebrate Pathology, https://doi.org/10.1016/j.jip.2022.107782
  56. Hammer A.J. et al. (2022): Reducing carbon emissions in aquaculture: Using Carbon Disclosures to identify unbalanced mitigation strategies. Environmental Impact Assessment Review, https://doi.org/10.1016/j.eiar.2022.106816
  57. Wang A. et al. (2022): Climate-Change Refugia for the Bubblegum Coral Paragorgia arborea in the Northwest Atlantic. Frontiers in Marine Science https://doi.org/10.3389/fmars.2022.863693
  58. Vad J. et al. (2022): Marine Sponges in a Snowstorm – Extreme Sensitivity of a Sponge Holobiont to Marine Oil Snow and Chemically Dispersed Oil Pollution. Frontiers in Microbiology, https://doi.org/10.3389/fmicb.2022.909853
  59. Schoening T. et al. (2022): Making marine image data FAIR. Scientific Data, https://doi.org/10.1038/s41597-022-01491-3
  60. Morato T. et al. (2022): Modelling the Dispersion of Seafloor Massive Sulphide Mining Plumes in the Mid Atlantic Ridge Around the Azores. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2022.910940
  61. Schumacher M. et al. (2022): The Atlantic Ocean landscape: A basin-wide cluster analysis of the Atlantic near seafloor environment. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2022.936095
  62. Martins I. et al. (2022): Beyond deep-sea mining sublethal effects: Delayed mortality from acute Cu exposure of the cold-water octocoral Viminella flagellum. Marine Pollution Bulletin, https://doi.org/10.1016/j.marpolbul.2022.114051
  63. Narganes Homfeldt T. et al. (2022): Seasonal and diel patterns in singing activity of humpback whales migrating through Bermuda. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2022.941793
  64. Perez A. and Sant’Ana R. (2022): Tropicalization of demersal megafauna in the western South Atlantic since 2013. Communications Earth & Environment, https://doi.org/10.1038/s43247-022-00553-z
  65. Strachan L. et al. (2022): A regional and international framework for evaluating seagrass management and conservation. Marine Policy, https://doi.org/10.1016/j.marpol.2022.105306
  66. Carreiro-Silva M. et al. (2022): Mechanical and toxicological effects of deep-sea mining sediment plumes on a habitat-forming cold-water octocoral. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2022.915650
  67. Fox A. et al. (2022): Exceptional freshening and cooling in the eastern subpolar North Atlantic caused by reduced Labrador Sea surface heat loss. Ocean Science, https://doi.org/10.5194/os-18-1507-2022
  68. Versteegh E. et al. (2022): Multiple nutritional strategies of hydrothermal vent shrimp (Rimicaris hybisae) assemblages at the Mid-Cayman Rise. Deep-Sea Research Part I, https://doi.org/10.1016/j.dsr.2022.103915
  69. O’Reilly L. et al. (2022): Environmental forcing by submarine canyons: Evidence between two closely situated cold-water coral mounds (Porcupine Bank Canyon and Western Porcupine Bank, NE Atlantic). Marine Geology, https://doi.org/10.1016/j.margeo.2022.106930
  70. Corbera G. et al. (2022): Local-scale feedbacks influencing cold-water coral growth and subsequent reef formation. Scientific Reports, https://doi.org/10.1038/s41598-022-24711-7
  71. Fraser N. et al. (2022): North Atlantic Current and European Slope Current circulation in the Rockall Trough observed using moorings and gliders. Journal of Geophysical Research Oceans, https://doi.org/10.1029/2022JC019291
  72. Schulzki T. et al. (2022): Toward ocean hindcasts in earth system models: AMOC variability in a partially coupled model at eddying resolution. Journal of Advances in Modelling Earth Systems (JAMES), https://doi.org/10.1029/2022MS003200
  73. De Clippele L. et al. (2022): Evaluating annual severe coral bleaching risk for marine protected areas across Indonesia. Marine Policy, https://doi.org/10.1016/j.marpol.2022.105428
  74. Rühs S. et al. (2022): Robust estimates for the decadal evolution of Agulhas leakage from the 1960s to the 2010s. Nature Communications Earth & Environment, https://doi.org/10.1038/s43247-022-00643-y
  75. Grove T. et al. (2023): A decade of humpback whale abundance estimates at Bermuda, an oceanic migratory stopover site. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2022.971801
  76. Roberts M. et al. (2023): A blueprint for integrating scientific approaches and international communities to assess basin-wide ocean ecosystem status. Nature Communications Earth & Environment, https://doi.org/10.1038/s43247-022-00645-w
  77. Chidichimo M.P. et al. (2023): Energetic overturning flows, dynamic interocean exchanges, and ocean warming observed in the South Atlantic. Nature Communications Earth & Environment, https://doi.org/10.1038/s43247-022-00644-x
  78. Perez R. et al. (2023): Inclusive Science in the South Atlantic. Nature Communications Earth & Environment, https://doi.org/10.1038/s43247-022-00646-9
  79. McCarthy G.D. et al. (2023): Climate change impacts on ocean circulation relevant to the UK and Ireland. MCCIP Science Review, https://doi.org/10.14465/2023.reu05.cir
  80. Gaurisas D.Y. et al. (2023): Benthic biogeographic patterns on the deep Brazilian margin. PeerJ, https://doi.org/10.7717/peerj.14585
  81. Durden, J.M. et al. (2023): First in-situ observation of sponge response and recovery to an industrial sedimentation event. Marine Pollution Bulletin, https://doi.org/10.1016/j.marpolbul.2023.114870
  82. Portanier et al. (2023): Coupling large-spatial scale larval dispersal modelling with barcoding to refine the amphi-Atlantic connectivity hypothesis in deep-sea seep mussels. Frontiers in Marine Science, https://doi.org/10.3389/fmars.2023.1122124
  83. Ward et al. (2023): Habitat Suitability Models of a Critically Endangered Cold‑water Coral, Isidella Elongata, in the Mallorca Channel. Thalassas: An International Journal of Marine Sciences, https://doi.org/10.1007/s41208-023-00531-y
  84. Gori et al. (2023): Natural hypoxic conditions do not affect the respiration rates of the cold-water coral Desmophyllum pertusum (Lophelia pertusa) living in the Angola margin (Southeastern Atlantic Ocean). Deep Sea Research Part I, https://doi.org/10.1016/j.dsr.2023.104052  
  85. Mohn et al. (2023): Tidal to decadal scale hydrodynamics at two contrasting cold-water coral sites in the Northeast Atlantic. Progress in Oceanography, https://doi.org/10.1016/j.pocean.2023.103031
  86. Arnaubec et al. (2023): Underwater 3D Reconstruction from Video or Still Imagery: Matisse and 3DMetrics Processing and Exploitation Software. Journal of Marine Science and Engineering, https://doi.org/10.3390/jmse11050985
  87. Barnhill et al. (2023): Ship-to-shore training for active deep-sea capacity development. ICES Journal of Marine Science, https://doi.org/10.1093/icesjms/fsad088.
  88. Vinha et al. (2023): Trophic ecology of Angolan cold‐water coral reefs (SE Atlantic) based on stable isotope analyses. Scientific Reports, https://doi.org/10.1038/s41598-023-37035-x
  89. Strong et al. (2023): Recovery and restoration potential of cold-water corals: experience from a deep-sea marine protected area. Restoration Ecology, http://doi.org/10.1111/rec.13970
  90. Georgoulas et al. (2023): Smoothed particle hydrodynamics for modelling cold-water coral habitats in changing oceans. Journal of Sea Research, https://doi.org/10.1016/j.seares.2023.102358
  91. Fauconnet et al. (2023): Challenges in avoiding deep-water shark bycatch in Azorean hook-and-line fisheries. ICES Journal of Marine Science, https://doi.org/10.1093/icesjms/fsac178
  92. Boittiaux et al. (2023): Eiffel Tower: A deep-sea underwater dataset for long-term visual localization. The International Journal of Robotics Research, https://doi.org/10.1177/0278364923117732
  93. Maier et al. (2023): On the paradox of thriving cold-water coral reefs in the food-limited deep sea. Biological Reviews, https://doi.org/10.1111/brv.12976
  94. Orejas et al. (2023): Reproductive characteristics and gametogenic cycle of the scleractinian coral ‘Dendrophyllia ramea’. Life & Environment, https://doi.org/10.7717/peerj.16079

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This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 818123 (iAtlantic). This output reflects only the author’s view and the European Union cannot be held responsible for any use that may be  made of the information contained therein.